stdpipe package

STDPipe - Simple Transient Detection Pipeline.

STDPipe is a set of Python routines for astrometry, photometry and transient detection related tasks, intended for quick and easy implementation of custom pipelines, as well as for interactive data analysis.

Submodules

• stdpipe.artefacts module
• stdpipe.astrometry module
  • get_frame_center()
  • get_pixscale()
  • radectoxyz()
  • xyztoradec()
  • spherical_distance()
  • spherical_match()
  • planar_match()
  • get_objects_center()
  • blind_match_objects()
  • blind_match_astrometrynet()
  • refine_wcs_simple()
  • clear_wcs()
  • wcs_pv2sip()
  • wcs_sip2pv()
  • table_to_ldac()
  • refine_wcs_scamp()
  • store_wcs()
  • upscale_wcs()
  • fit_astrometric_residuals()
  • refine_positions_from_catalog()
• stdpipe.astrometry_quad module
  • Inputs
  • Outputs
  • mag_signature()
  • tan_project_deg()
  • estimate_similarity_2d()
  • apply_similarity()
  • estimate_affine_2d()
  • apply_affine()
  • make_local_quads()
  • quad_descriptor()
  • quad_descriptor_batch()
  • quantize_desc()
  • reflect_desc()
  • neighbors_bins()
  • multiprobe_desc_keys()
  • compute_bin_edges()
  • baseline_rank_bins()
  • QuadEntry
    • QuadEntry.idxs
    • QuadEntry.desc
    • QuadEntry.bin_id
    • QuadEntry.mags
  • build_quad_hash_multiscale()
  • AstrometryConfig
    • AstrometryConfig.n_det
    • AstrometryConfig.n_ref
    • AstrometryConfig.neighbor_k
    • AstrometryConfig.eps_desc
    • AstrometryConfig.bin_neighbor_radius
    • AstrometryConfig.n_scale_bins
    • AstrometryConfig.allow_reflection
    • AstrometryConfig.use_mag_signature
    • AstrometryConfig.use_wcs_prior
    • AstrometryConfig.scale_tolerance
    • AstrometryConfig.enforce_parity
    • AstrometryConfig.stage1_n_det
    • AstrometryConfig.stage1_radius_arcsec
    • AstrometryConfig.stage2_radius_arcsec
    • AstrometryConfig.top_k_hypotheses
    • AstrometryConfig.max_quads_tested
    • AstrometryConfig.max_candidates_per_bucket
    • AstrometryConfig.use_multiprobe
    • AstrometryConfig.sip_degree
    • AstrometryConfig.refine_clip_sigma
    • AstrometryConfig.refine_clip_sigma_start
    • AstrometryConfig.refine_min_match_fraction
    • AstrometryConfig.refine_max_iter
    • AstrometryConfig.refine_rematch_iters
    • AstrometryConfig.refine_use_all
    • AstrometryConfig.refine_n_det
    • AstrometryConfig.refine_n_ref
    • AstrometryConfig.refine_match_radius_arcsec
    • AstrometryConfig.auto_match_resolution
    • AstrometryConfig.adaptive_n_retry
    • AstrometryConfig.adaptive_min_inliers
  • QuadHashAstrometry
    • QuadHashAstrometry.refine()
  • refine_wcs_quadhash()
• stdpipe.astrometry_wcs module
  • fit_zpn_wcs_from_points()
  • tan_wcs_to_zpn()
  • convert_wcs_projection()
  • fit_wcs_from_points()
• stdpipe.catalogs module
  • augment_cat_bands()
  • get_cat_vizier()
  • xmatch_objects()
  • xmatch_skybot()
  • xmatch_ned()
• stdpipe.cutouts module
  • crop_image_centered()
  • crop_image()
  • get_cutout()
  • write_cutout()
  • load_cutout()
  • adjust_cutout()
  • downscale_image()
• stdpipe.db module
  • DB
    • DB.connect()
    • DB.query()
• stdpipe.lcs module
  • LCs
    • LCs.add()
    • LCs.cluster()
• stdpipe.photometry module
  • dilate()
  • make_kernel()
  • estimate_fwhm()
  • FWHMMap
    • FWHMMap.coeffs
    • FWHMMap.order
    • FWHMMap.x0
    • FWHMMap.y0
    • FWHMMap.sx
    • FWHMMap.sy
    • FWHMMap.median
    • FWHMMap.n_used
    • FWHMMap.fwhm_range
  • estimate_fwhm_from_objects()
  • get_objects_sep()
  • get_objects_sextractor()
  • ConstantBackground
  • get_value()
  • get_objects_photutils()
• stdpipe.photometry_background module
  • get_background_percentile()
  • get_background_morphology()
  • estimate_background_rms_percentile()
  • estimate_background_rms_local()
  • get_background_polynomial()
  • get_background_gp()
  • get_background()
• stdpipe.photometry_iraf module
  • measure_objects()
  • measure_objects_psf()
• stdpipe.photometry_measure module
  • measure_objects()
  • measure_objects_sep()
  • measure_aperture_deblended()
• stdpipe.photometry_model module
  • make_series()
  • get_intrinsic_scatter()
  • format_color_term()
  • match()
  • make_sn_model()
  • get_detection_limit_sn()
• stdpipe.photometry_psf module
  • GradientLocalBackground
  • measure_objects_psf()
• stdpipe.pipeline module
  • make_mask()
  • refine_astrometry()
  • filter_transient_candidates()
  • calibrate_photometry()
  • make_random_stars()
  • place_random_stars()
  • split_sub_fn()
  • split_image()
  • get_subimage_centered()
  • get_detection_limit()
• stdpipe.plots module
  • colorbar()
  • imshow()
  • binned_map()
  • adaptive_binned_map()
  • plot_cutout()
  • plot_photometric_match()
  • plot_detection_limit()
  • plot_mag_histogram()
  • figure_saver()
  • plot_outline()
  • cornerplot()
• stdpipe.psf module
  • run_psfex()
  • load_psf()
  • bilinear_interpolate()
  • get_supersampled_psf_stamp()
  • get_psf_stamp()
  • place_psf_stamp()
  • create_psf_model()
  • enclosed_psf_fraction()
  • select_psf_seeds()
• stdpipe.realbogus module
  • create_realbogus_model()
  • preprocess_cutout()
  • extract_cutouts()
  • load_realbogus_model()
  • save_realbogus_model()
  • classify_realbogus()
  • train_realbogus_classifier()
• stdpipe.realbogus_features module
• stdpipe.reproject module
  • reproject_lanczos()
  • reproject_swarp()
• stdpipe.resolve module
  • simbadResolve()
  • parseSexadecimal()
  • tnsResolve()
  • resolve()
• stdpipe.sfft module
  • SFFTResult
    • SFFTResult.diff
    • SFFTResult.model
    • SFFTResult.kernel_coeffs
    • SFFTResult.bg_coeffs
    • SFFTResult.kernel_shape
    • SFFTResult.kernel_poly_order
    • SFFTResult.bg_poly_order
    • SFFTResult.flux_poly_order
    • SFFTResult.flux_poly_coeffs
    • SFFTResult.n_iter
    • SFFTResult.rms
    • SFFTResult.n_good
  • solve()
  • evaluate_kernel_at()
  • evaluate_flux_scale()
  • evaluate_background()
• stdpipe.simulation module
  • create_psf_model()
  • create_sersic_profile()
  • place_galaxy()
  • create_cosmic_ray()
  • add_cosmic_rays()
  • add_hot_pixels()
  • add_bad_columns()
  • create_satellite_trail()
  • add_satellite_trails()
  • create_diffraction_spikes()
  • create_optical_ghost()
  • add_close_companions_to_catalog()
  • add_stars()
  • add_galaxies()
  • simulate_image()
  • generate_realbogus_training_data()
• stdpipe.smoothing module
• stdpipe.subtraction module
  • run_hotpants()
  • run_zogy()
  • run_sfft()
• stdpipe.templates module
  • get_hips_image()
  • dilate_mask()
  • mask_template()
  • point_in_ps1()
  • point_in_ls()
  • find_skycells()
  • fits_open_remote()
  • get_skycells()
  • normalize_ps1_skycell()
  • get_survey_image()
  • get_survey_image_and_mask()
  • get_ps1_image()
  • get_ps1_image_and_mask()
  • get_ls_image()
  • get_ls_image_and_mask()
• stdpipe.utils module
  • breakpoint()
  • make_jname()
  • get_data_path()
  • download()
  • get_obs_time()
  • table_get()
  • format_astromatic_opts()
  • format_long_opts()
  • parse_det()
  • crop_overscans()
  • rebin_image()
  • file_write()
  • file_read()
  • fits_write()